Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_84188580_84191659_R

Intron Information:

Intron Rank:

141851

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84188580 - 84191659

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TACCCCTAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTACCCCTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

0.82

0.8

83.9

25.3

Major PPT

59.4

0.21

0.9

55.2

33.8

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

61.6

0.44

1.8

81.26

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035737

84181077 - 84191809

10733