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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8482706_8490989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8482706 - 8490989

Intron Length:

8284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCCC

Flanking Amino Acid:

GRVPYPRPGTCPSKTFGGFD

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

46.8

-0.2

3.6

78.32

37.8

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046379

8346550 - 8515401

168852

ENSAPLT00000013989

8346264 - 8515401

169138

ENSAPLT00000013411

8271191 - 8515401

244211