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Intron Name: Anas_platyrhynchos_platyrhynchos_1_84828857_84829531_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84828857 - 84829531

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACGGCTC

5'SS Class:

weak_major

3'SS Sequence:

CTTCTCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

TTCTCCCTACAG

Flanking Amino Acid:

LLWSQAAVAQRLPVRSVDFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.23

1.2

52.6

44.7

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

83.1

0.75

0.7

76.7

25.5

Minor 5ss

35.5

-1.6

3.6

46.6

43.1

Minor BPS

48.5

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

LSAMP

Ensembl Gene ID:

ENSAPLG00000010325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043094

84828757 - 85088152

259396

ENSAPLT00000041993

84828757 - 85088152

259396