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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8503972_8507953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8503972 - 8507953

Intron Length:

3982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

ATAATACTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TAATTTTCAAAT

Flanking Amino Acid:

SCSRYFPTAKRRTRRQDIRN

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

71.2

0.48

62.8

42.5

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

55.2

0.24

1.6

71.41

39.1

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046379

8346550 - 8515401

168852

ENSAPLT00000013989

8346264 - 8515401

169138

ENSAPLT00000013411

8271191 - 8515401

244211