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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85069175_85087677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85069175 - 85087677

Intron Length:

18503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCGCACCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CTTCTCGCACCC

Flanking Amino Acid:

GVTNASLYLYRPGTGRVDNG

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

0.45

0.9

62.3

34.3

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

41.1

-0.6

2.3

55.1

43.3

Associated Gene:

Gene:

LSAMP

Ensembl Gene ID:

ENSAPLG00000010325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041993

84828757 - 85088152

259396