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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85075393_85087677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85075393 - 85087677

Intron Length:

12285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCGCACCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CTTCTCGCACCC

Flanking Amino Acid:

VLPTLPNPFPGPGTGRVDNG

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.2

87.1

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

0.45

0.9

62.3

34.3

Minor 5ss

34.7

-1.7

2.7

42.8

Minor BPS

41.1

-0.6

2.3

55.1

43.3

Associated Gene:

Gene:

LSAMP

Ensembl Gene ID:

ENSAPLG00000010325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030660

84810591 - 85087775

277185

ENSAPLT00000010753

84765510 - 85087775

322266

ENSAPLT00000043094

84828757 - 85088152

259396