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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85374777_85410054_F

Intron Information:

Intron Rank:

141682

Intron Class:

major

Intron Phase:

Intron Coordinates:

85374777 - 85410054

Intron Length:

35278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

ACATCTTAAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

77.8

0.69

78.2

31.8

Major PPT

88.2

0.86

0.7

80.6

31.5

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

48.7

-0.1

1.9

57.77

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020722

85374492 - 85410407

35916