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Intron Name: Anas_platyrhynchos_platyrhynchos_1_854352_855103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

854352 - 855103

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TATTCCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AATACATTATTC

Flanking Amino Acid:

DTVLSRIRKMADQCSGLQGF

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

34.4

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

0.63

0.9

71.4

33.9

Minor 5ss

28.7

-2.4

3.5

43.2

Minor BPS

48.7

-0.1

1.8

60.35

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036602

852893 - 857001

4109

ENSAPLT00000007118

852893 - 859090

6198