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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85820999_85821892_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
85820999 - 85821892

Intron Length:
894

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTAAGATCC

5'SS Class:
strong_major

3'SS Sequence:
TCCTCTTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCGGAT

U12 Branch Point Sequence:
TGTTTCCCAGTT

Flanking Amino Acid:
ASTKPCCAHEEHIERQSLSD

Intron Amino Acid Position:
246

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.7
0.72
0.9
72.3
31.7

Major BPS
57.6
0.19
1.4
57.1
41.8

Major PPT
87.9
0.85
0.7
83.4
24.8

Minor 5ss
40.9
-1
3
52.6
38.2

Minor BPS
46.3
-0.2
2
69.58
41.5

Associated Gene:

Gene:
DRD3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

85819817 - 85823025
3209

85813006 - 85823025
10020