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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85833907_85836112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85833907 - 85836112

Intron Length:

2206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ACATCTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATGCACA

Flanking Amino Acid:

VTAELPEDKPRIIHGMGKPD

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.3

0.59

0.9

69.1

36.2

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

49.1

-0

2.2

69.55

42.4

Associated Gene:

Gene:

QTRT2

Ensembl Gene ID:

ENSAPLG00000001359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001435

85830011 - 85841854

11844