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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85839307_85841499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85839307 - 85841499

Intron Length:

2193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GGTTCATTAAGC

Flanking Amino Acid:

EYKKGAAKFIGMPDTAVYCS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

82.2

0.8

0.9

81.6

Major PPT

70.5

0.46

60.8

44.7

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

58.5

0.24

1.9

69.49

41.3

Associated Gene:

Gene:

QTRT2

Ensembl Gene ID:

ENSAPLG00000001359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001435

85830011 - 85841854

11844