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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85853281_85854770_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
85853281 - 85854770

Intron Length:
1490

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGTTC

5'SS Class:
major

3'SS Sequence:
TCCACTTCTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCCAC

U12 Branch Point Sequence:
TTGTTTCCACTT

Flanking Amino Acid:
QLTSAHPILKAMEERAIQRA

Intron Amino Acid Position:
624

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
68.4
37.2

Major BPS
67.4
0.43
1.3
78.4
35.2

Major PPT
74.3
0.55
0.8
69.2
31.3

Minor 5ss
47.4
-0.2
3
67.5
43.9

Minor BPS
43.5
-0.4
2
63.69
41.7

Associated Gene:

Gene:
CCDC191

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

85841975 - 85860662
18688