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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85869625_85870110_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
85869625 - 85870110

Intron Length:
486

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGGCT

5'SS Class:
major

3'SS Sequence:
TCCCTCCCGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
GTGTGTTTATTC

Flanking Amino Acid:
DCRELDEGCDRWLTCRSLPP

Intron Amino Acid Position:
36

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1.2
70.5
38.9

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
69.1
0.43
0.9
64.6
31

Minor 5ss
37.4
-1.4
3.6
56.7
47.6

Minor BPS
47.8
-0.1
2
58.18
41.7

Associated Gene:

Gene:
ZDHHC23

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

85867047 - 85870217
3171