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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85873668_85874150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85873668 - 85874150

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

GTTCTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CCTGACTTAATT

Flanking Amino Acid:

TTTIIVVMSVFLLLLVLLNI

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

78.2

0.7

77.9

32.1

Major PPT

83.2

0.75

0.8

77.4

31.3

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

60.2

0.4

1.7

72.18

45.2

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225

ENSAPLT00000016163

85871006 - 85909003

37998