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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85874209_85875718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85874209 - 85875718

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAGTC

5'SS Class:

strong_major

3'SS Sequence:

CCATGCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

GACTTTATAACC

Flanking Amino Acid:

MGLESQGSIIGRKRDPVNRT

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

73.3

36.4

Major BPS

77.9

0.69

78.3

31.3

Major PPT

64.9

0.34

0.9

54.9

36.3

Minor 5ss

33.6

-1.9

3.7

49.4

47.1

Minor BPS

53.2

0.08

1.6

60.62

38.5

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225

ENSAPLT00000016163

85871006 - 85909003

37998