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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85875899_85876590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85875899 - 85876590

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGGCAT

5'SS Class:

major

3'SS Sequence:

TTTTTTACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

GGIQENFKQLESDLLMEEYA

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

67.4

39.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

90.3

0.91

0.7

86.2

26.6

Minor 5ss

27.1

-2.6

3.3

35.2

42.4

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016163

85871006 - 85909003

37998

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225