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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85878535_85879633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85878535 - 85879633

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTCT

5'SS Class:

major

3'SS Sequence:

TCTTTTCTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ATATACTTACTC

Flanking Amino Acid:

GKFTTATEKQILHKQSQKGQ

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

66.1

40.1

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

83.8

0.76

0.7

80.1

25.4

Minor 5ss

38.4

-1.3

3.5

57.3

46.9

Minor BPS

55.8

0.16

1.8

66.71

38.8

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016163

85871006 - 85909003

37998

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225