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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85887142_85890771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85887142 - 85890771

Intron Length:

3630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTGGTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTTCCTATTG

Flanking Amino Acid:

ESLSRHALSGVEESPTETQI

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

79.5

0.66

76.9

42.1

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

53.2

-0

67.42

40.8

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225

ENSAPLT00000016163

85871006 - 85909003

37998