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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85890893_85891996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85890893 - 85891996

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTGGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTCCTTTGGACA

Flanking Amino Acid:

HSSSEDNGQSRSSVCDEPGE

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.4

39.5

Major BPS

73.5

0.59

81.3

29.9

Major PPT

73.3

0.52

71.4

38.4

Minor 5ss

30.3

-2.3

3.3

39.1

46.1

Minor BPS

51.7

0.05

1.4

63.67

36.6

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225

ENSAPLT00000016163

85871006 - 85909003

37998