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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85899238_85902662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85899238 - 85902662

Intron Length:

3425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACACGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TTTCTCTTTACA

Flanking Amino Acid:

HLPDSERLIVDYACALQKDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

72.8

0.57

30.3

Major PPT

71.1

0.48

0.9

67.1

33.2

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

69.4

0.6

1.6

80.69

34.2

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032461

85870867 - 85919412

48546

ENSAPLT00000023718

85870867 - 85908091

37225

ENSAPLT00000016163

85871006 - 85909003

37998