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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85908092_85908877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

85908092 - 85908877

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAACGCT

5'SS Class:

major

3'SS Sequence:

GTTTCTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AAATGTTAAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

64.8

39.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

84.7

0.78

0.8

81.8

30.2

Minor 5ss

38.5

-1.3

3.5

53.4

45.7

Minor BPS

45.4

-0.2

2.1

61.51

42.1

Associated Gene:

Gene:

GRAMD1C

Ensembl Gene ID:

ENSAPLG00000015479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016163

85871006 - 85909003

37998