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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85957280_85957643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85957280 - 85957643

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTTTAATGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

HNSGTDLNRTYLWRLQFLLP

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

74.4

34.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.1

0.66

40.3

Minor 5ss

39.8

-1.1

3.4

58.5

40.5

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

CLDND1

Ensembl Gene ID:

ENSAPLG00000015243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015888

85956813 - 85959239

2427