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Intron Name: Anas_platyrhynchos_platyrhynchos_1_85994276_85995061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85994276 - 85995061

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTTCCTGAATC

Flanking Amino Acid:

KHRDGVGLRSDRGSSHSARS

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.3

42.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

28.6

-2.5

2.8

41.8

Minor BPS

75.1

0.77

1.3

80.43

33.9

Associated Gene:

Gene:

ILDR1

Ensembl Gene ID:

ENSAPLG00000015216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047631

85994234 - 86007254

13021

ENSAPLT00000037164

85994234 - 86006508

12275