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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86031997_86032498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86031997 - 86032498

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

CCTCCTTGCATT

Flanking Amino Acid:

AEDIEDPNAYNIEEVKQKEE

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

29.9

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

80.9

0.7

0.9

77.3

35.9

Minor 5ss

33.8

-1.8

3.5

47.5

42.5

Minor BPS

46.1

-0.2

1.9

61.4

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015695

86017562 - 86032694

15133