Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_86051532_86052035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86051532 - 86052035

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TAGTACTAAACT

Flanking Amino Acid:

GSAQRDYQPSRLPSSRPEDS

Intron Amino Acid Position:

982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

76.5

38.7

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

74.4

0.55

0.8

65.5

36.1

Minor 5ss

33.2

-1.9

2.8

43.4

43.5

Minor BPS

60.9

0.42

1.9

78.24

43.6

Associated Gene:

Gene:

BOC

Ensembl Gene ID:

ENSAPLG00000015054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015691

86050566 - 86067037

16472