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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86056803_86057611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86056803 - 86057611

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGGCCC

5'SS Class:

major

3'SS Sequence:

TCCACTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ATGTCTTTGATG

Flanking Amino Acid:

SNQSDNSRLSPPEAPDRPTI

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.4

53.1

42.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

81.5

0.71

0.8

75.9

32.5

Minor 5ss

33.9

-1.8

3.3

40.9

Minor BPS

64.9

0.32

1.3

63.92

38.8

Associated Gene:

Gene:

BOC

Ensembl Gene ID:

ENSAPLG00000015054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015691

86050566 - 86067037

16472