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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86061404_86062084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86061404 - 86062084

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CGCTGCTCAGCA

Flanking Amino Acid:

AFIFYNVQVFEPPEVTMELS

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

0.61

0.9

73.5

31.4

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

43.5

-0.4

2.1

52.02

45.8

Associated Gene:

Gene:

BOC

Ensembl Gene ID:

ENSAPLG00000015054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015691

86050566 - 86067037

16472