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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86062379_86062624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86062379 - 86062624

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGCCGC

5'SS Class:

major

3'SS Sequence:

CTCTCGTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

TTCCTCCCACCT

Flanking Amino Acid:

SVSSERLRVRRSTAEAARII

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.4

47.1

Major BPS

1.2

61.8

35.9

Major PPT

69.7

0.44

0.9

62.2

38.6

Minor 5ss

39.6

-1.2

3.1

50.2

39.7

Minor BPS

44.2

-0.3

2.1

65.92

44.5

Associated Gene:

Gene:

BOC

Ensembl Gene ID:

ENSAPLG00000015054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015691

86050566 - 86067037

16472