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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86153290_86157155_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86153290 - 86157155

Intron Length:

3866

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCT|GCAAGATGA

5'SS Class:

weak_major

3'SS Sequence:

TAAATTCCAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

GAGACATAAATT

Flanking Amino Acid:

QAWALCFQCCSGCLLQILCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.5

52.9

Major BPS

62.2

0.3

1.1

68.9

Major PPT

53.9

0.09

1.1

54.2

Minor 5ss

29.9

-2.3

4.1

48.2

47.4

Minor BPS

46.2

-0.2

1.9

60.01

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030710

86153207 - 86157944

4738