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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86171905_86172848_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86171905 - 86172848

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGCATCT

5'SS Class:

weak_major

3'SS Sequence:

AACAGAACGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACAGAA

U12 Branch Point Sequence:

TCCTCCAGGAAA

Flanking Amino Acid:

TAVTGATGSSAQAGHSAVMT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.24

1.3

55.6

42.9

Major BPS

49.3

-0

0.9

44.7

28.3

Major PPT

48.3

-0.1

1.1

37.4

38.8

Minor 5ss

34.5

-1.8

4.3

53.6

45.5

Minor BPS

-0.3

1.9

57.27

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015329

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015967

86171760 - 86174878

3119