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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86291116_86291484_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

86291116 - 86291484

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TCCTCCCCGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TAACATCTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

69.1

41.9

Major BPS

0.52

1.1

77.7

35.3

Major PPT

57.3

0.17

1.1

56.5

33.9

Minor 5ss

40.8

-1

54.6

42.6

Minor BPS

49.4

0.04

1.8

69.88

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018321

86290695 - 86310131

19437