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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86296959_86302549_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86296959 - 86302549

Intron Length:

5591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTCCGTCT

5'SS Class:

weak_major

3'SS Sequence:

GTTTTGTATTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTCCATGACT

Flanking Amino Acid:

SSMKIDHFQLDNEKPMKVIE

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.4

56.3

43.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.4

0.41

1.2

72.3

Minor 5ss

40.2

-1.1

3.3

46.2

Minor BPS

68.5

0.66

1.6

82.71

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018321

86290695 - 86310131

19437