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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86325599_86327602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86325599 - 86327602

Intron Length:

2004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGTAG

5'SS Class:

major

3'SS Sequence:

TTTTTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

VAEYLTPVLKESKFKETGVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

55.6

39.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.8

82.6

32.6

Minor 5ss

29.6

-2.3

3.3

37.4

47.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029668

86325527 - 86332074

6548