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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86382310_86382476_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86382310 - 86382476

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAAGTAG

5'SS Class:

weak_major

3'SS Sequence:

CTTCTCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTACAA

U12 Branch Point Sequence:

CTTCTCTTAACA

Flanking Amino Acid:

RPTLRMELLGCCSLPLGMEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.1

49.3

37.6

Major BPS

52.2

0.06

34.9

Major PPT

80.7

0.69

0.8

76.8

30.4

Minor 5ss

32.9

-2

3.4

46.6

48.8

Minor BPS

77.1

0.85

1.2

80.35

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029543

86378700 - 86384876

6177