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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86392533_86395702_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86392533 - 86395702

Intron Length:

3170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCACCA

5'SS Class:

major

3'SS Sequence:

GTGCCGCGGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGGCAT

U12 Branch Point Sequence:

CTGCCCGGCATG

Flanking Amino Acid:

LWVVRWHNTEARPGGPGCCW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.2

56.4

42.8

Major BPS

44.1

-0.3

1.5

48.7

45.1

Major PPT

42.1

-0.4

1.7

38.6

Minor 5ss

36.7

-1.5

3.2

49.5

46.2

Minor BPS

37.1

-1.1

2.3

40.94

43.9

Associated Gene:

Gene:

SLC19A2

Ensembl Gene ID:

ENSAPLG00000007314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007587

86392496 - 86403775

11280