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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86671031_86675456_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86671031 - 86675456

Intron Length:

4426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTTCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

ATCTGACTAACA

Flanking Amino Acid:

GATTTFSAVDRDRQWKFIVC

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

72.6

39.2

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

78.4

0.64

0.9

73.3

31.6

Minor 5ss

57.9

0.27

2.4

73.9

42.6

Minor BPS

46.4

-0.2

2.3

63.71

42.3

Associated Gene:

Gene:

DPT

Ensembl Gene ID:

ENSAPLG00000016421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017139

86649772 - 86675523

25752