Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_86818589_86819363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86818589 - 86819363

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

AGTCATTCAATT

Flanking Amino Acid:

HTKGAASPGPSHYPCLWTVS

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

0.67

1.1

77.7

37.1

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

48.9

-0

1.7

66.23

38.2

Associated Gene:

Gene:

TBX19

Ensembl Gene ID:

ENSAPLG00000010506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010947

86818351 - 86830737

12387