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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86855235_86856089_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
86855235 - 86856089

Intron Length:
855

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGTAT

5'SS Class:
major

3'SS Sequence:
TTCACTTCTTGAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATAAAAT

Flanking Amino Acid:
VACAEEWQESRSETEHTKEV

Intron Amino Acid Position:
94

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.1
69.1
38

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
61.1
0.25
1.7
73.2
37.1

Minor 5ss
36.7
-1.5
3.6
55.1
49.1

Minor BPS
56.2
0.27
2
82.05
39.1

Associated Gene:

Gene:
TIPRL

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

86850897 - 86859355
8459