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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86873394_86874228_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86873394 - 86874228

Intron Length:

835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAGGTGCA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTTTCT

Flanking Amino Acid:

PAACGFVVPAPIPASYCLIH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.4

57.2

42.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

89.5

0.89

0.6

20.1

Minor 5ss

33.4

-1.9

3.4

45.1

43.2

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385