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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86875768_86876242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86875768 - 86876242

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATG

5'SS Class:

strong_major

3'SS Sequence:

GTGTATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATAATTAATG

Flanking Amino Acid:

KKWCGSVPWQDPKTTKVSKN

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.7

0.53

66.6

43.6

Minor 5ss

43.2

-0.7

2.9

57.1

47.2

Minor BPS

-0

1.8

60.2

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385