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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86877212_86877919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86877212 - 86877919

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTCAT

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

AGCTTTTGGATT

Flanking Amino Acid:

HLEVQLRQKKNTLATVNIQV

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

38.4

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

-1.6

49.5

46.7

Minor BPS

48.7

-0

1.4

61.41

36.8

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385