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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86879156_86879379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86879156 - 86879379

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTTTTGTAAACA

Flanking Amino Acid:

SSEYCGHGFGMNSGVQNLYG

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

84.1

0.77

0.8

81.2

36.4

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

51.2

0.03

2.3

71.26

41.2

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385