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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86879538_86880581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86879538 - 86880581

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTCACGCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTTCCTTCAAAT

Flanking Amino Acid:

TVAEDPPGLKVPLLLHQKQA

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

77.3

0.68

81.5

Major PPT

0.43

0.9

64.8

36.3

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

64.3

0.53

1.6

83.38

37.1

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385