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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86880664_86880962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86880664 - 86880962

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

GTTATCATAACT

Flanking Amino Acid:

ESQRPCGGILADDMGLGKTL

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.3

39.5

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.86

0.7

80.3

31.7

Minor 5ss

39.2

-1.2

2.8

43.8

Minor BPS

64.8

0.54

1.7

82.55

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385