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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86882189_86882843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86882189 - 86882843

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TTCCTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTTCCTTTATG

Flanking Amino Acid:

HGPNRDKHAEVLSEYDVVVT

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.8

38.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

84.2

0.77

0.8

80.6

30.3

Minor 5ss

37.3

-1.4

3.3

51.5

44.9

Minor BPS

74.4

0.62

1.6

79.54

36.8

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385