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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86885563_86886132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86885563 - 86886132

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TAAATCCCAGTC

Flanking Amino Acid:

SVYNVLFARSRSTLQSYLKR

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

100

1.12

0.4

100

Minor 5ss

43.1

-0.8

2.9

57.4

46.9

Minor BPS

39.4

-0.8

1.8

46.3

35.9

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385