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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86886216_86886894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86886216 - 86886894

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGCA

5'SS Class:

major

3'SS Sequence:

CTTTCCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GAGCTCTTAATA

Flanking Amino Acid:

DYAGVNPFEKVAQDFGVSQK

Intron Amino Acid Position:

934

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.9

35.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.5

0.66

0.9

76.6

31.9

Minor 5ss

35.4

-1.7

2.9

42.3

44.4

Minor BPS

62.3

0.38

1.3

62.48

37.6

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385