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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86887035_86887819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86887035 - 86887819

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTGTA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TAATCCTTTATT

Flanking Amino Acid:

CCCHLSLLKVALDQANLTSE

Intron Amino Acid Position:

981

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

36.5

-1.5

3.3

46.3

44.2

Minor BPS

70.1

0.71

1.6

82.12

39.3

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027819

86873167 - 86892570

19404

ENSAPLT00000010782

86873167 - 86893551

20385