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Intron Name: Anas_platyrhynchos_platyrhynchos_1_86892426_86893409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86892426 - 86893409

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGACT

5'SS Class:

major

3'SS Sequence:

TTTGTATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTCCTAGCAGT

Flanking Amino Acid:

VGQKKDVVIHRFVCEGTVEE

Intron Amino Acid Position:

1161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.3

76.1

39.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.81

0.8

77.7

40.6

Minor 5ss

30.3

-2.3

41.4

44.7

Minor BPS

41.6

-0.5

2.3

67.08

43.5

Associated Gene:

Gene:

TTF2

Ensembl Gene ID:

ENSAPLG00000010324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010782

86873167 - 86893551

20385