Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_86909667_86910164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86909667 - 86910164

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TCTTTTTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATCTTTTTACCT

Flanking Amino Acid:

RGKTLKASADGKLPFCAMGV

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.6

0.64

0.8

73.6

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

62.8

0.48

1.6

77.06

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027846

86903537 - 86910893

7357

ENSAPLT00000010741

86902505 - 86910893

8389